Miyakogusa Predicted Gene

Lj0g3v0269859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K1W7_SOYBN 1037 81.0 92.5 (tr|I1K1W7) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G01580.1 665 51.7 72.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:223529-225511 REVERSE LENGTH=660
Medicago Medtr4g015760.2 1006 78.2 89.8 | PPR containing plant-like protein | HC | chr4:4766254-4759488 | 20130731
Soybean Glyma05g14140.1 1035 81.0 92.5  
LJGI gnl|LJGI|AV769545 470 99.6 99.6 weakly similar to UniRef100_Q8GVW4 Cluster: Selenium-binding protein-like; n=1; Oryza sativa Japonica Group|Rep: Selenium-binding protein-like - Oryza sativa subsp. japonica (Rice), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0269859.1 length: 605 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.063 48-69
251-277
279-309
453-477
HMMPfam PF13041 PPR_2 4.3e-09 175-223
377-426
HMMPfam PF13812 PPR_3 0.33 75-102
150-175
HMMTigr TIGR00756 PPR: 7.1e-05 178-212
279-313
ProfileScan PS51375 PPR 5.492 74-109
43-73
176-210
145-175
110-144
211-245
277-311
246-276
378-413
347-377
312-346
414-444
450-480
516-550
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.4e-05 513-536
no_ID  
HMMPanther PTHR24015 FAMILY 3.4e-202 5-605
HMMPanther PTHR24015:SF168SUBFAMILY NOT 3.4e-202 5-605
Wolf-PSORT
Lj0g3v0269859.1	E.R. 4, chlo 3, E.R._vacu 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0269859.1