Miyakogusa Predicted Gene

Lj0g3v0269529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KWZ9_SOYBN 935 71.4 80.0 (tr|I1KWZ9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G16890.1 711 55.3 73.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Medicago Medtr8g070060.1 988 73.0 83.7 | pentatricopeptide (PPR) repeat protein | HC | chr8:29740887-29742940 | 20130731
Soybean Glyma08g36160.1 999 76.3 85.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0269529.1 length: 689 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0089 197-225
HMMPfam PF13041 PPR_2 5.4e-15 227-276
439-487
508-556
582-626
HMMPfam PF13812 PPR_3 0.25 373-403
HMMTigr TIGR00756 PPR: 3.7e-09 196-228
230-264
265-299
372-403
441-474
476-510
511-545
547-579
581-614
616-650
ProfileScan PS51375 PPR 8.495 123-157
193-227
158-192
228-262
263-297
369-403
334-368
439-473
404-438
474-508
509-543
544-578
579-613
614-648
649-683
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.1e-06 523-675
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-153 27-681
HMMPanther PTHR24015:SF0 SUBFAMILY 1.5e-153 27-681
Seg seg seg NA 6-21
Wolf-PSORT
Lj0g3v0269529.1	chlo 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0269529.1