Miyakogusa Predicted Gene
- Lj0g3v0269449.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L902_MEDTR |
599 |
77.5 |
83.6 |
(tr|G7L902) Lipase OS=Medicago truncatula GN=MTR_8g103850 PE=4 SV=1 |
| TAIR_pep |
AT1G73920.1 |
481 |
65.0 |
73.1 |
| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:27791194-27794698 FORWARD LENGTH=704 |
| Medicago |
Medtr8g103850.1 |
599 |
77.5 |
83.6 |
| alpha/beta hydrolase family protein | HC | chr8:43710571-43705546 | 20130731 |
| Soybean |
Glyma07g09860.1 |
583 |
74.0 |
81.4 |
|
| LJGI |
gnl|LJGI|FS326602 |
214 |
85.2 |
85.2 |
similar to UniRef100_Q9LPR0 Cluster: F15H18.7; n=1; Arabidopsis thaliana|Rep: F15H18.7 - Arabidopsis thaliana (Mouse-ear cress), partial (27%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0269449.1 |
length: 384 aa. |
| IPR006693 |
Partial AB-hydrolase lipase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| HMMPfam |
PF04083 |
Abhydro_lipase |
5.8e-15 |
292-346 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
8.8e-26 |
288-382 |
| HMMPanther |
PTHR11005 |
LYSOSOMAL |
7.5e-37 |
279-384 |
| HMMPanther |
PTHR11005:SF0 |
SUBFAMILY |
7.5e-37 |
279-384 |
| Seg |
seg |
seg |
NA |
109-122 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
1.2e-09 |
288-369 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
25 |
47 |
| 136 |
158 |
- Wolf-PSORT
Lj0g3v0269449.1 chlo 7, cyto 2, mito 2, nucl 1, vacu 1, E.R. 1, cyto_mito 1, E.R._vacu 1, cyto_pero 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0269449.1 |
|