Miyakogusa Predicted Gene
- Lj0g3v0269309.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N231_SOYBN |
198 |
72.6 |
80.0 |
(tr|K7N231) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G33406.1 |
158 |
56.3 |
68.9 |
| Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr5:12676126-12678403 REVERSE LENGTH=509 |
| Medicago |
Medtr1g055005.1 |
48.5 |
48.8 |
72.1 |
| hypothetical protein | LC | chr1:24193861-24193136 | 20130731 |
| Soybean |
Glyma09g09280.2 |
89.0 |
43.2 |
67.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0269309.2 |
length: 134 aa. |
| IPR008906 |
HAT dimerisation |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| HMMPfam |
PF05699 |
Dimer_Tnp_hAT |
5.4e-12 |
13-79 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
2.6e-24 |
9-85 |
| no_ID |
|
| HMMPanther |
PTHR10775 |
UNCHARACTERIZED |
4.9e-47 |
1-131 |
| HMMPanther |
PTHR10775:SF75 |
HAT |
4.9e-47 |
1-131 |
- Wolf-PSORT
Lj0g3v0269309.2 chlo 8, nucl 2, cyto 1, plas 1, extr 1, pero 1, cysk_nucl 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0269309.2 |
|