Miyakogusa Predicted Gene

Lj0g3v0268089.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SR97_LOTJA 402 94.2 94.2 (tr|I3SR97) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G15150.1 221 50.7 69.3 | Symbols: HPY2, MMS21, ATMMS21 | RING/U-box superfamily protein | chr3:5102210-5104082 REVERSE LENGTH=249
Medicago Medtr2g078640.1 307 67.6 82.1 | E3 SUMO-protein ligase MMS21 | HC | chr2:32838536-32831603 | 20130731
Soybean Glyma13g34860.1 307 68.3 83.4  
LJGI gnl|LJGI|TC62308 1237 100.0 100.0 weakly similar to UniRef100_A7P1T1 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0268089.3 length: 206 aa.
IPR013083 Zinc finger, RING/FYVE/PHD-type
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.40.10 no description 7.3e-09 119-175
IPR026846 E3 SUMO-protein ligase Nse2 (Mms21)
Biological Process GO:0000724 double-strand break repair via homologous recombination    
Molecular Function GO:0019789 SUMO ligase activity    
Cellular Component GO:0030915 Smc5-Smc6 complex    
Biological Process GO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion    
Biological Process GO:0045842 positive regulation of mitotic metaphase/anaphase transition    
HMMPanther PTHR21330 UNCHARACTERIZED 2.2e-35 3-206
no_ID  
Coil coil coiled-coil NA 3-31
HMMPanther PTHR21330:SF1 UNCHARACTERIZED 2.2e-35 3-206
HMMPfam PF11789 zf-Nse 1.4e-17 113-165
Seg seg seg NA 24-35
superfamily SSF57850 RING/U-box 7.4e-10 119-180
Wolf-PSORT
Lj0g3v0268089.3	cyto 6, nucl 4, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0268089.3