| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7KK93_MEDTR | 515 | 66.5 | 82.4 | (tr|G7KK93) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_6g077540 PE=4 SV=1 |
| TAIR_pep | AT1G62930.1 | 292 | 39.3 | 64.0 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23306534-23308423 FORWARD LENGTH=629 |
| Medicago | Medtr6g079210.1 | 528 | 67.0 | 83.8 | | pentatricopeptide (PPR) repeat protein | HC | chr6:29865926-29867095 | 20130731 |
| Soybean | Glyma09g07290.1 | 483 | 63.2 | 80.3 | |
| LJGI | gnl|LJGI|GO030841 | 315 | 83.0 | 83.0 | weakly similar to UniRef100_A7R617 Cluster: Chromosome undetermined scaffold_1129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%) |
| Lj0g3v0267639.1 | length: 369 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF12854 | PPR_1 | 3.5e-11 | 154-186 193-221 |
| HMMPfam | PF13041 | PPR_2 | 4.6e-14 | 18-66 90-136 228-277 300-345 |
| HMMTigr | TIGR00756 | PPR: | 0.00026 | 21-55 56-83 91-125 126-160 162-194 196-230 231-265 266-296 302-334 336-367 |
| ProfileScan | PS51375 | PPR | 10.128 | 19-53 54-88 89-123 124-158 159-193 194-228 229-263 264-298 299-333 334-368 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 8.7e-06 | 231-361 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 2.5e-125 | 1-366 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 2.5e-125 | 1-366 |
| superfamily | SSF48452 | TPR-like | 9.1e-06 | 22-292 |
Lj0g3v0267639.1 cyto 8, pero 4, cyto_nucl 4, cyto_plas 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0267639.1 |