Miyakogusa Predicted Gene

Lj0g3v0267599.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEI6_SOYBN 711 63.5 81.0 (tr|K7LEI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12700.1 410 40.8 61.0 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr0308s0020.1 734 64.9 81.0 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma09g30530.1 708 65.2 83.5  
LJGI gnl|LJGI|AV766731 498 88.3 88.3 weakly similar to UniRef100_A7P2U1 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0267599.1 length: 539 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 5.4e-10 81-110
188-218
363-393
HMMPfam PF13041 PPR_2 2.3e-13 120-169
225-274
296-344
401-449
471-517
HMMTigr TIGR00756 PPR: 0.0017 88-122
123-156
158-192
193-227
228-262
263-297
299-332
334-366
368-401
403-437
438-471
474-507
508-538
ProfileScan PS51375 PPR 9.635 51-85
86-120
121-155
156-190
191-225
226-260
261-295
296-330
331-365
366-400
401-435
471-505
436-470
506-539
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-175 6-538
HMMPanther PTHR24015:SF0 SUBFAMILY 1.2e-175 6-538
Wolf-PSORT
Lj0g3v0267599.1	mito 5.5, chlo_mito 5.33333, cyto_mito 3.66667, chlo 3, nucl 2, cyto 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0267599.1