Miyakogusa Predicted Gene

Lj0g3v0267169.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S2I4_LOTJA 1018 88.9 93.1 (tr|I3S2I4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G30700.1 638 61.0 76.7 | Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527
Medicago Medtr2g031560.1 884 75.4 86.4 | reticuline oxidase-like protein | HC | chr2:11916968-11918950 | 20130731
Soybean Glyma09g03270.1 847 76.0 84.9  
LJGI gnl|LJGI|TC69424 805 91.3 91.3 similar to UniRef100_A7Q4U4 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0267169.1 length: 573 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 9.1e-27 83-218
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 4.7e-18 472-530
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.008 77-251
superfamily SSF56176 FAD-binding 3.1e-47 16-252
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 2.9e-13 137-252
no_ID  
HMMPanther PTHR32448 FAMILY 3.5e-290 6-537
Seg seg seg NA 9-24
180-191
Putative transmembrane regions
  From To
TM segments
SOSUI		 15 37
224 245
Wolf-PSORT
Lj0g3v0267169.1	chlo 11, nucl 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0267169.1