| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IAC3_MEDTR | 159 | 52.3 | 65.8 | (tr|G7IAC3) Type I MADS box transcription factor OS=Medicago truncatula GN=MTR_1g084950 PE=3 SV=1 |
| TAIR_pep | AT5G48670.1 | 85.9 | 43.4 | 59.6 | | Symbols: FEM111, AGL80 | AGAMOUS-like 80 | chr5:19738825-19739790 REVERSE LENGTH=321 |
| Medicago | Medtr1g084950.1 | 159 | 52.3 | 65.8 | | MADS-box transcription factor family protein | HC | chr1:37921217-37920747 | 20130731 |
| Soybean | Glyma10g28320.1 | 157 | 53.7 | 67.8 | |
| LJGI | --No_Hits-- |
| Lj0g3v0267059.1 | length: 154 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0046983 | protein dimerization activity | ||
| FPrintScan | PR00404 | MADSDOMAIN | 8.8e-09 | 3-23 23-38 |
| HMMPfam | PF00319 | SRF-TF | 2.5e-13 | 11-48 |
| HMMSmart | SM00432 | no description | 4.2e-21 | 1-60 |
| ProfileScan | PS50066 | MADS_BOX_2 | 16.946 | 1-47 |
| superfamily | SSF55455 | SRF-like | 2.4e-23 | 1-86 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 93-114 134-155 |
| HMMPanther | PTHR11945 | MADS | 5.9e-41 | 1-117 |
| HMMPanther | PTHR11945:SF72 | SEQUENCE-SPECIFIC | 5.9e-41 | 1-117 |
| Seg | seg | seg | NA | 15-31 100-112 |
Lj0g3v0267059.1 cyto 8, nucl 2, plas 1.5, golg_plas 1.5, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0267059.1 |