Miyakogusa Predicted Gene

Lj0g3v0266959.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L5Z0_SOYBN 378 72.9 81.0 (tr|I1L5Z0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G01220.1 211 47.9 63.5 | Symbols: ATHB20, HB20 | homeobox protein 20 | chr3:73599-75295 FORWARD LENGTH=286
Medicago Medtr7g010020.1 357 69.2 78.8 | homeobox leucine zipper ATHB-like protein | HC | chr7:2343858-2340754 | 20130731
Soybean Glyma09g37410.1 378 72.9 81.0  
LJGI gnl|LJGI|TC66153 198 81.2 81.2 similar to UniRef100_A7QEH5 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0266959.1 length: 266 aa.
IPR000047 Helix-turn-helix motif
method AccNumber shortName E-value location
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding    
FPrintScan PR00031 HTHREPRESSR 1e-05 105-114
114-130
IPR001356 Homeodomain
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1e-15 80-132
HMMSmart SM00389 Homeodomain 2.1e-17 77-138
ProfileScan PS50071 HOMEOBOX_2 16.989 74-134
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 1.7e-07 134-173
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.2e-17 79-132
superfamily SSF46689 Homeodomain-like 3.1e-18 74-149
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 109-132
no_ID  
Coil coil coiled-coil NA 147-175
HMMPanther PTHR24326 FAMILY 1.8e-67 35-209
HMMPanther PTHR24326:SF74 SUBFAMILY 1.8e-67 35-209
Wolf-PSORT
Lj0g3v0266959.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0266959.1