Miyakogusa Predicted Gene
- Lj0g3v0266429.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I6LNS9_HEVBR |
74.3 |
54.5 |
62.3 |
(tr|I6LNS9) Mitochondrial 50S ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2 SV=1 |
| TAIR_pep |
AT4G30930.1 |
66.2 |
51.9 |
57.1 |
| Symbols: NFD1 | Ribosomal protein L21 | chr4:15050170-15051630 REVERSE LENGTH=270 |
| Medicago |
Medtr2g058400.1 |
66.2 |
49.4 |
57.1 |
| 50S ribosomal protein L21, related protein | HC | chr2:24132316-24136266 | 20130731 |
| Soybean |
Glyma07g31650.1 |
67.4 |
56.2 |
60.3 |
|
| LJGI |
gnl|LJGI|TC61628 |
230 |
99.2 |
99.2 |
similar to UniRef100_A7R4U1 Cluster: 50S ribosomal protein L21; n=1; Vitis vinifera|Rep: 50S ribosomal protein L21 - Vitis vinifera (Grape), partial (52%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0266429.1 |
length: 67 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
54-67 |
- Wolf-PSORT
Lj0g3v0266429.1 cyto 6, chlo 2, nucl 1.5, chlo_mito 1.5, cysk_nucl 1.5, mito 1, plas 1, vacu 1, pero 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0266429.1 |
Not targeted |
-44.286 |
-0.596 |
-6.392 |
63.02% |
-37.299
|