Miyakogusa Predicted Gene

Lj0g3v0266309.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K743_MEDTR 540 83.6 90.8 (tr|G7K743) Serine palmitoyltransferase OS=Medicago truncatula GN=MTR_5g072020 PE=4 SV=1
TAIR_pep AT4G36480.2 495 75.3 85.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain base1 | chr4:17218598-17221124 FORWARD LENGTH=482
Medicago Medtr5g072020.1 540 83.6 90.8 | long chain base biosynthesis protein 1a | HC | chr5:30640537-30633377 | 20130731
Soybean Glyma17g35800.1 528 81.9 88.8  
LJGI gnl|LJGI|TC77389 1158 99.3 99.3 similar to UniRef100_A7QR10 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0266309.1 length: 308 aa.
IPR004839 Aminotransferase, class I/classII
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 5.2e-28 113-296
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4e-60 132-306
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 4e-54 70-306
no_ID  
Coil coil coiled-coil NA 229-250
HMMPanther PTHR13693 CLASS 9.1e-150 34-307
HMMPanther PTHR13693:SF2 SERINE 9.1e-150 34-307
Seg seg seg NA 42-56
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
33 55
Wolf-PSORT
Lj0g3v0266309.1	chlo 4, cyto 3, plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0266309.1