Miyakogusa Predicted Gene

Lj0g3v0265559.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL M5WMZ4_PRUPE 265 71.1 82.8 (tr|M5WMZ4) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009753mg PE=4 SV=1
TAIR_pep AT5G62500.1 226 65.3 79.5 | Symbols: ATEB1B, ATEB1, EB1B | end binding protein 1B | chr5:25092929-25095006 FORWARD LENGTH=293
Medicago Medtr0036s0210.1 287 78.3 85.6 | RP/EB family microtubule-associated protein | HC | scaffold0036:80265-85368 | 20130731
Soybean Glyma17g10720.1 263 72.9 82.9  
LJGI gnl|LJGI|TC62647 440 99.1 99.1 similar to UniRef100_A7QEG4 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0265559.1 length: 198 aa.
IPR001715 Calponin homology domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.10.418.10 no description 4.3e-12 3-47
superfamily SSF47576 Calponin-homology 3.7e-08 3-47
IPR004953 EB1, C-terminal
Molecular Function GO:0008017 microtubule binding    
HMMPfam PF03271 EB1 2.9e-18 122-160
ProfileScan PS51230 EB1_C 15.796 97-167
superfamily SSF140612 EB1 7.6e-19 104-167
IPR027328 Microtubule-associated protein RP/EB
Molecular Function GO:0008017 microtubule binding    
HMMPanther PTHR10623 MICROTUBULE-ASSOCIATED 1.8e-47 4-197
no_ID  
Coil coil coiled-coil NA 105-126
HMMPanther PTHR10623:SF6 MICROTUBULE-ASSOCIATED 1.8e-47 4-197
Seg seg seg NA 92-101
183-197
Wolf-PSORT
Lj0g3v0265559.1	nucl 8.5, nucl_plas 5.5, mito 2, plas 1.5, chlo_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0265559.1