Miyakogusa Predicted Gene

Lj0g3v0265489.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MNX2_SOYBN 206 42.6 60.5 (tr|K7MNX2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep --No_Hits--

Medicago Medtr0043s0030.1 58.9 29.8 50.0 | transmembrane protein, putative | LC | scaffold0043:28883-20600 | 20130731

Soybean Glyma07g22540.1 154 31.2 49.1

LJGI gnl|LJGI|TC62529 1754 98.4 98.4 similar to UniRef100_A5VDL3 Cluster: AAA ATPase; n=1; Sphingomonas wittichii RW1|Rep: AAA ATPase - Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273), partial (3%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0265489.1 length: 374 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 335-356

Seg seg seg NA 8-17
307-313

Wolf-PSORT

Lj0g3v0265489.1 pero 7, mito 5, chlo 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0265489.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MNX2_SOYBN	206	42.6	60.5	(tr\|K7MNX2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	Medtr0043s0030.1	58.9	29.8	50.0	\| transmembrane protein, putative \| LC \| scaffold0043:28883-20600 \| 20130731
Soybean	Glyma07g22540.1	154	31.2	49.1
LJGI	gnl\|LJGI\|TC62529	1754	98.4	98.4	similar to UniRef100_A5VDL3 Cluster: AAA ATPase; n=1; Sphingomonas wittichii RW1\|Rep: AAA ATPase - Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273), partial (3%)

no_ID
Lj0g3v0265489.1				length: 374 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	335-356
Seg	seg	seg	NA	8-17 307-313