Miyakogusa Predicted Gene

Lj0g3v0265449.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MP19_SOYBN 444 63.7 73.1 (tr|I1MP19) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G09730.1 158 39.2 60.3 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD LENGTH=621
Medicago Medtr6g040070.1 359 70.9 84.9 | DEAD/DEAH-box helicase | HC | chr6:14397151-14388452 | 20130731
Soybean Glyma16g27680.1 444 63.7 73.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0265449.1 length: 353 aa.
IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:1.10.1900.10 no description 3.9e-08 305-351
HMMPfam PF00658 PABP 1.4e-07 299-349
HMMSmart SM00517 C-terminal 0.00086 292-351
ProfileScan PS51309 PABC 8.701 279-353
superfamily SSF63570 PABC 1.1e-07 305-349
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.6e-17 127-292
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
ProfileScan PS51192 HELICASE_ATP_BIND_1 14.829 133-314
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 8.002 102-130
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.9e-25 91-298
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.1e-32 94-296
HMMPanther PTHR24031 FAMILY 4.6e-35 92-351
HMMPanther PTHR24031:SF35 DEAD/DEAH 4.6e-35 92-351
Seg seg seg NA 36-51
Wolf-PSORT
Lj0g3v0265449.1	mito 8, chlo_mito 5.33333, cyto_mito 4.83333, nucl 3, chlo 1.5, cysk_nucl 1.5, nucl_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0265449.1