Miyakogusa Predicted Gene

Lj0g3v0265109.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K151_SOYBN 741 74.4 79.1 (tr|K7K151) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77180.2 620 62.4 71.5 | Symbols: SKIP | chromatin protein family | chr1:28999791-29001632 REVERSE LENGTH=613
Medicago Medtr2g030450.1 740 73.5 77.5 | GAMYB-binding protein | HC | chr2:11456477-11453867 | 20130731
Soybean Glyma01g01190.1 744 73.9 78.1  
LJGI gnl|LJGI|TC62820 991 96.0 96.0 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1; Glycine max|Rep: GAMYB-binding protein - Glycine max (Soybean), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0265109.1 length: 523 aa.
IPR004015 SKI-interacting protein SKIP, SNW domain
method AccNumber shortName E-value location
Biological Process GO:0000398 mRNA splicing, via spliceosome    
Cellular Component GO:0005681 spliceosomal complex    
HMMPfam PF02731 SKIP_SNW 1.1e-65 105-264
IPR017862 SKI-interacting protein, SKIP
Biological Process GO:0000398 mRNA splicing, via spliceosome    
Cellular Component GO:0005681 spliceosomal complex    
HMMPanther PTHR12096 NUCLEAR 4.6e-234 1-506
no_ID  
Coil coil coiled-coil NA 60-81
232-264
306-339
Seg seg seg NA 55-65
151-166
238-256
267-286
315-336
Wolf-PSORT
Lj0g3v0265109.1	cyto 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0265109.1