Miyakogusa Predicted Gene
- Lj0g3v0264999.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N3F1_SOYBN |
214 |
64.3 |
75.0 |
(tr|K7N3F1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G54160.1 |
50.8 |
30.5 |
51.9 |
| Symbols: | RNI-like superfamily protein | chr3:20053468-20055027 FORWARD LENGTH=434 |
| Medicago |
Medtr4g080590.1 |
60.8 |
33.3 |
47.6 |
| F-box/RNI/FBD-like domain protein | HC | chr4:31220054-31216957 | 20130731 |
| Soybean |
Glyma20g28060.1 |
214 |
64.3 |
75.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0264999.1 |
length: 169 aa. |
| IPR006566 |
FBD |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08387 |
FBD |
6.7e-09 |
88-133 |
| HMMSmart |
SM00579 |
domain |
1.3e-06 |
94-169 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
2 |
24 |
| 27 |
49 |
- Wolf-PSORT
Lj0g3v0264999.1 chlo 6, extr 4, nucl 1, cyto 1, plas 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0264999.1 |
|