Miyakogusa Predicted Gene
- Lj0g3v0264419.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JGH5_SOYBN |
400 |
85.8 |
92.2 |
(tr|I1JGH5) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G60920.1 |
370 |
75.7 |
87.2 |
| Symbols: COB | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family | chr5:24511466-24513932 REVERSE LENGTH=456 |
| Medicago |
Medtr7g015950.1 |
398 |
79.1 |
86.3 |
| COBRA-like protein 2 precursor | HC | chr7:5005154-5009539 | 20130731 |
| Soybean |
Glyma02g35400.1 |
401 |
85.8 |
92.2 |
|
| LJGI |
gnl|LJGI|GO025608 |
583 |
92.3 |
92.3 |
similar to UniRef100_Q69F98 Cluster: Phytochelatin synthetase-like protein; n=1; Phaseolus vulgaris|Rep: Phytochelatin synthetase-like protein - Phaseolus vulgaris (Kidney bean) (French bean), partial (29%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0264419.1 |
length: 235 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31673 |
FAMILY |
2.1e-133 |
1-235 |
| HMMPanther |
PTHR31673:SF0 |
SUBFAMILY |
2.1e-133 |
1-235 |
| Seg |
seg |
seg |
NA |
218-231 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
212 |
234 |
- Wolf-PSORT
Lj0g3v0264419.1 extr 5, vacu 4, chlo 1, mito 1, plas 1, E.R. 1, golg 1, chlo_mito 1, golg_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0264419.1 |
|