Miyakogusa Predicted Gene

Lj0g3v0264339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K768_SOYBN 374 75.7 86.5 (tr|K7K768) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G31430.1 181 50.3 71.0 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:11254025-11255737 REVERSE LENGTH=570
Medicago Medtr6g093170.1 299 61.0 78.8 | PPR containing protein | HC | chr6:35177726-35180122 | 20130731
Soybean Glyma07g27600.1 351 75.5 85.2  
LJGI gnl|LJGI|BP063629 862 99.8 99.8 weakly similar to UniRef100_A7PEX7 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0264339.1 length: 230 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.041 139-162
HMMPfam PF13041 PPR_2 8.7e-09 68-111
167-215
HMMTigr TIGR00756 PPR: 7.8e-10 70-98
169-204
ProfileScan PS51375 PPR 6.478 66-100
167-201
136-166
101-135
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00017 70-194
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-63 4-230
HMMPanther PTHR24015:SF61 PGR3 3.2e-63 4-230
Wolf-PSORT
Lj0g3v0264339.1	chlo 5, nucl 5, cyto 2, plas 1, extr 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0264339.1