Miyakogusa Predicted Gene

Lj0g3v0263879.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3F4_LOTJA 504 54.3 71.4 (tr|I3T3F4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G20710.1 381 43.2 66.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
Medicago Medtr8g465890.1 646 63.9 78.7 | PPR containing plant protein | HC | chr8:23498318-23503190 | 20130731
Soybean Glyma13g37360.1 393 50.6 67.4  
LJGI gnl|LJGI|FS336552 708 86.5 86.5 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0263879.1 length: 492 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.021 167-195
200-226
307-332
344-370
378-400
HMMTigr TIGR00756 PPR: 1.2e-05 167-196
ProfileScan PS51375 PPR 7.980 164-198
126-160
234-264
339-373
304-338
270-300
374-408
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-08 298-401
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-130 1-443
HMMPanther PTHR24015:SF160LIPOYLTRANSFERASE, PUTATIVE 1.5e-130 1-443
superfamily SSF48452 TPR-like 0.016 232-402
161-264
Wolf-PSORT
Lj0g3v0263879.1	mito 8.5, chlo 5, cyto_mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0263879.1