Miyakogusa Predicted Gene

Lj0g3v0262999.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KL10_SOYBN 902 73.8 84.9 (tr|I1KL10) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G13770.1 578 54.4 71.8 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:4445461-4447290 FORWARD LENGTH=609
Medicago Medtr1g033840.1 890 72.4 82.6 | PPR containing plant-like protein | HC | chr1:12239375-12241751 | 20130731
Soybean Glyma20g01350.1 885 72.9 83.7  
LJGI gnl|LJGI|GO024562 1320 99.6 99.6 similar to UniRef100_A7QBY8 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262999.1 length: 610 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1.7e-05 231-258
276-298
303-329
407-437
512-537
HMMPfam PF13041 PPR_2 4.8e-13 439-485
HMMTigr TIGR00756 PPR: 2.5e-05 407-437
442-476
478-510
512-544
ProfileScan PS51375 PPR 7.662 158-192
227-261
266-300
335-369
405-439
370-404
440-474
475-509
510-544
545-579
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.6e-08 273-529
no_ID  
HMMPanther PTHR24015 FAMILY 4.7e-84 26-586
Seg seg seg NA 28-45
superfamily SSF81901 HCP-like 3.2e-10 231-488
Wolf-PSORT
Lj0g3v0262999.1	chlo 11, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262999.1