Miyakogusa Predicted Gene

Lj0g3v0262469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3J1_LOTJA 200 82.9 82.9 (tr|I3T3J1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT5G20570.1 187 80.2 81.9 | Symbols: ROC1, RBX1, HRT1, ATRBX1 | RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=118
Medicago Medtr2g088570.1 189 81.0 81.9 | anaphase-promoting complex subunit 11 RING-H2 finger protein | HC | chr2:37336904-37340640 | 20130731
Soybean Glyma12g10750.1 197 83.3 83.3  
LJGI gnl|LJGI|TC60612 708 100.0 100.0 homologue to UniRef100_Q2PYP4 Cluster: RING-box protein; n=1; Arachis hypogaea|Rep: RING-box protein - Arachis hypogaea (Peanut), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262469.1 length: 117 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.480 62-107
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-36 29-116
IPR024766 Zinc finger, RING-H2-type
HMMPfam PF12678 zf-rbx1 7.3e-37 30-107
no_ID  
HMMPanther PTHR11210 RING 5.8e-69 1-117
Seg seg seg NA 13-29
superfamily SSF57850 RING/U-box 2.3e-40 28-115
Putative transmembrane regions
  From To
TM segments
SOSUI		 37 59
Wolf-PSORT
Lj0g3v0262469.1	nucl 7, chlo 4, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262469.1