database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1KFB6_SOYBN | 932 | 85.8 | 89.9 | (tr|I1KFB6) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
TAIR_pep | AT1G05230.4 | 770 | 69.9 | 79.5 | | Symbols: HDG2 | homeodomain GLABROUS 2 | chr1:1513388-1517024 REVERSE LENGTH=721 |
Medicago | Medtr4g047800.1 | 915 | 82.0 | 88.3 | | homeobox leucine zipper protein | HC | chr4:16823143-16830472 | 20130731 |
Soybean | Glyma06g46000.1 | 932 | 85.8 | 89.9 | |
LJGI | gnl|LJGI|TC75175 | 1088 | 99.5 | 99.5 | homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
Lj0g3v0262429.2 | length: 535 aa. | |||
IPR001356 | Homeodomain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003700 | sequence-specific DNA binding transcription factor activity | ||
Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
HMMPfam | PF00046 | Homeobox | 3.3e-18 | 60-115 |
HMMSmart | SM00389 | Homeodomain | 1.1e-19 | 58-121 |
ProfileScan | PS50071 | HOMEOBOX_2 | 16.989 | 57-117 |
IPR002913 | START domain | |||
HMMPfam | PF01852 | START | 3.2e-64 | 251-470 |
HMMSmart | SM00234 | in | 6.5e-62 | 250-470 |
ProfileScan | PS50848 | START | 43.422 | 241-473 |
IPR009057 | Homeodomain-like | |||
Molecular Function | GO:0003677 | DNA binding | ||
Gene3D | G3DSA:1.10.10.60 | no description | 2e-21 | 40-115 |
superfamily | SSF46689 | Homeodomain-like | 2.6e-19 | 43-116 |
IPR017970 | Homeobox, conserved site | |||
Cellular Component | GO:0005634 | nucleus | ||
Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
PatternScan | PS00027 | HOMEOBOX_1 | NA | 92-115 |
IPR023393 | START-like domain | |||
Gene3D | G3DSA:3.30.530.20 | no description | 1.6e-05 | 345-437 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 123-144 |
HMMPanther | PTHR24325 | FAMILY | 0 | 57-535 |
HMMPanther | PTHR24325:SF5 | SUBFAMILY | 0 | 57-535 |
Seg | seg | seg | NA | 198-211 402-414 |
superfamily | SSF55961 | Bet | 0.017 | 240-473 488-535 |
Lj0g3v0262429.2 nucl 14
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0262429.2 |