Miyakogusa Predicted Gene

Lj0g3v0262169.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K942_SOYBN 1022 79.0 85.4 (tr|K7K942) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G13770.1 876 70.5 82.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:4519647-4521533 FORWARD LENGTH=628
Medicago Medtr1g059280.1 1041 84.8 90.6 | pentatricopeptide (PPR) repeat protein | HC | chr1:21515828-21518970 | 20130731
Soybean Glyma02g29450.1 1004 83.0 89.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262169.1 length: 653 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0031 226-252
327-352
430-453
HMMPfam PF13041 PPR_2 1.8e-07 159-204
252-299
353-401
HMMTigr TIGR00756 PPR: 0.0019 161-195
254-285
356-389
430-453
ProfileScan PS51375 PPR 7.454 93-127
159-193
128-158
252-286
221-251
353-387
322-352
287-321
389-423
426-460
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-289 5-653
HMMPanther PTHR24015:SF76 SUBFAMILY 2.1e-289 5-653
HMMPfam PF14432 DYW_deaminase 2.9e-15 533-641
Seg seg seg NA 56-75
Wolf-PSORT
Lj0g3v0262169.1	chlo 10.5, chlo_mito 7.33333, mito 3, cyto_mito 2.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262169.1