Miyakogusa Predicted Gene

Lj0g3v0262149.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5VVK0_PRUPE 728 58.7 74.3 (tr|M5VVK0) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002924mg PE=4 SV=1
TAIR_pep AT4G18750.1 370 34.0 56.4 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10304850-10307465 FORWARD LENGTH=871
Medicago Medtr8g107740.1 370 33.4 55.1 | pentatricopeptide (PPR) repeat protein | HC | chr8:45554142-45556499 | 20130731
Soybean Glyma15g42850.1 377 33.9 55.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262149.1 length: 630 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.011 10-39
82-109
183-209
212-238
248-274
284-306
313-340
389-414
491-514
HMMPfam PF13041 PPR_2 3.3e-09 109-155
414-462
HMMTigr TIGR00756 PPR: 7e-06 111-137
313-343
418-450
ProfileScan PS51375 PPR 7.772 7-41
109-139
78-108
178-212
143-177
245-279
310-344
415-449
384-414
450-485
486-516
551-586
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.7e-07 537-591
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-170 1-630
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.2e-170 1-630
Wolf-PSORT
Lj0g3v0262149.1	cyto 6.5, cyto_nucl 5.5, nucl 3.5, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262149.1