Miyakogusa Predicted Gene

Lj0g3v0262109.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J8X9_MEDTR 167 66.4 70.4 (tr|G7J8X9) Polyadenylate-binding protein OS=Medicago truncatula GN=MTR_3g092550 PE=4 SV=1
TAIR_pep AT1G32790.1 144 60.8 64.8 | Symbols: CID11 | CTC-interacting domain 11 | chr1:11875174-11877188 REVERSE LENGTH=358
Medicago Medtr3g092550.1 167 66.4 70.4 | CTC-interacting domain protein | HC | chr3:42290596-42284870 | 20130731
Soybean Glyma04g40760.1 167 68.8 68.8  
LJGI gnl|LJGI|TC81719 285 91.1 91.1 similar to UniRef100_Q0WQ17 Cluster: RNA-binding-like protein; n=1; Arabidopsis thaliana|Rep: RNA-binding-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262109.4 length: 125 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1e-07 6-72
HMMSmart SM00360 RNA 3.2e-08 5-76
ProfileScan PS50102 RRM 10.394 4-75
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 9.2e-10 3-75
no_ID  
HMMPanther PTHR24011 FAMILY 4e-37 1-75
HMMPanther PTHR24011:SF12 SUBFAMILY 4e-37 1-75
superfamily SSF54928 RNA-binding 6.5e-11 4-76
Wolf-PSORT
Lj0g3v0262109.4	chlo 6, cyto 4, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262109.4