database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | G7J8X9_MEDTR | 167 | 66.4 | 70.4 | (tr|G7J8X9) Polyadenylate-binding protein OS=Medicago truncatula GN=MTR_3g092550 PE=4 SV=1 |
TAIR_pep | AT1G32790.1 | 144 | 60.8 | 64.8 | | Symbols: CID11 | CTC-interacting domain 11 | chr1:11875174-11877188 REVERSE LENGTH=358 |
Medicago | Medtr3g092550.1 | 167 | 66.4 | 70.4 | | CTC-interacting domain protein | HC | chr3:42290596-42284870 | 20130731 |
Soybean | Glyma04g40760.1 | 167 | 68.8 | 68.8 | |
LJGI | gnl|LJGI|TC81719 | 285 | 91.1 | 91.1 | similar to UniRef100_Q0WQ17 Cluster: RNA-binding-like protein; n=1; Arabidopsis thaliana|Rep: RNA-binding-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (57%) |
Lj0g3v0262109.1 | length: 125 aa. | |||
IPR000504 | RNA recognition motif domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
HMMPfam | PF00076 | RRM_1 | 1e-07 | 6-72 |
HMMSmart | SM00360 | RNA | 3.2e-08 | 5-76 |
ProfileScan | PS50102 | RRM | 10.394 | 4-75 |
IPR012677 | Nucleotide-binding, alpha-beta plait | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Gene3D | G3DSA:3.30.70.330 | no description | 9.2e-10 | 3-75 |
no_ID | ||||
HMMPanther | PTHR24011 | FAMILY | 4e-37 | 1-75 |
HMMPanther | PTHR24011:SF12 | SUBFAMILY | 4e-37 | 1-75 |
superfamily | SSF54928 | RNA-binding | 6.5e-11 | 4-76 |
Lj0g3v0262109.1 chlo 6, cyto 4, nucl 3
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0262109.1 |