Miyakogusa Predicted Gene

Lj0g3v0261839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IW55_MEDTR 810 77.9 83.7 (tr|G7IW55) U-box domain-containing protein OS=Medicago truncatula GN=MTR_3g019360 PE=4 SV=1
TAIR_pep AT1G76390.2 107 25.8 41.0 | Symbols: | ARM repeat superfamily protein | chr1:28655914-28658531 FORWARD LENGTH=811
Medicago Medtr3g019360.1 810 77.9 83.7 | plant U-box protein, putative | HC | chr3:5430118-5433301 | 20130731
Soybean Glyma11g21270.1 757 75.1 79.8  
LJGI gnl|LJGI|TC62761 1273 99.8 99.8 similar to UniRef100_A7QRU0 Cluster: Chromosome chr13 scaffold_152, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_152, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0261839.1 length: 534 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00185 Armadillo/beta-catenin-like 1.8e+02 27-67
68-108
194-234
279-326
329-369
401-441
445-485
ProfileScan PS50176 ARM_REPEAT 9.327 79-121
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.7e-10 2-373
409-523
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.3e-42 40-489
no_ID  
HMMPanther PTHR23315 BETA 2.8e-175 1-504
HMMPanther PTHR23315:SF37 PUTATIVE 2.8e-175 1-504
HMMPfam PF05804 KAP 1.5e-07 19-351
Seg seg seg NA 95-109
257-268
360-381
Putative transmembrane regions
  From To
TM segments
SOSUI		 119 141
Wolf-PSORT
Lj0g3v0261839.1	plas 3.5, E.R._plas 3.5, E.R. 2.5, nucl 2, cyto 2, cyto_nucl 2, chlo 1, mito 1, vacu 1, golg 1, chlo_mito 1, cysk_nucl 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0261839.1