Miyakogusa Predicted Gene

Lj0g3v0261809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7ME10_SOYBN 129 47.9 66.4 (tr|K7ME10) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G03170.1 92.8 34.8 61.7 | Symbols: ASK14, SK14 | SKP1-like 14 | chr2:961322-961771 FORWARD LENGTH=149
Medicago Medtr2g065720.1 119 45.7 66.4 | SCF ubiquitin ligase, SKP1 component | LC | chr2:27549510-27548893 | 20130731
Soybean Glyma11g13370.1 101 42.2 60.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0261809.1 length: 164 aa.
IPR001232 SKP1 component
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPanther PTHR11165 SKP1 1.2e-36 11-156
HMMSmart SM00512 Found 1.9e-24 12-106
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 2.4e-34 9-156
superfamily SSF54695 POZ 2.4e-12 13-106
IPR016072 SKP1 component, dimerisation
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF01466 Skp1 1.7e-18 79-156
superfamily SSF81382 Skp1 2.3e-14 78-155
IPR016073 SKP1 component, POZ
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF03931 Skp1_POZ 7.7e-12 13-74
IPR016897 E3 ubiquitin ligase, SCF complex, Skp subunit
HMMPIR PIRSF028729 E3 7.5e-31 2-158
no_ID  
HMMPanther PTHR11165:SF47 ASK 1.2e-36 11-156
Seg seg seg NA 2-20
43-52
Wolf-PSORT
Lj0g3v0261809.1	nucl 7, cyto 6, cysk_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0261809.1