Miyakogusa Predicted Gene

Lj0g3v0261799.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J603_SOYBN 707 61.5 76.8 (tr|I1J603) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G12700.1 405 37.8 60.2 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr3g054110.1 625 53.9 72.0 | pentatricopeptide (PPR) repeat protein | HC | chr3:21460323-21462352 | 20130731
Soybean Glyma01g07160.1 705 61.5 76.8  
LJGI gnl|LJGI|FS346680 430 86.7 86.7 weakly similar to UniRef100_A7PJG0 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0261799.1 length: 570 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0068 518-547
HMMPfam PF12854 PPR_1 3.2e-08 265-297
HMMPfam PF13041 PPR_2 1.2e-12 72-116
137-186
208-254
304-353
374-422
447-493
HMMTigr TIGR00756 PPR: 0.00015 105-139
140-173
175-208
211-244
272-306
307-340
342-376
377-410
448-481
482-515
517-550
ProfileScan PS51375 PPR 9.317 68-102
103-137
138-172
173-207
208-242
270-304
305-339
340-374
375-409
410-444
480-514
445-479
515-549
no_ID  
HMMPanther PTHR24015 FAMILY 4.4e-148 12-559
HMMPanther PTHR24015:SF0 SUBFAMILY 4.4e-148 12-559
Seg seg seg NA 11-33
Wolf-PSORT
Lj0g3v0261799.1	chlo_mito 5.16667, chlo 5, mito 5, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0261799.1