Miyakogusa Predicted Gene

Lj0g3v0261399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J5I7_MEDTR 1451 81.0 87.0 (tr|G7J5I7) Ribonuclease J OS=Medicago truncatula GN=MTR_3g089020 PE=4 SV=1
TAIR_pep AT5G63420.1 1198 68.9 79.1 | Symbols: emb2746 | RNA-metabolising metallo-beta-lactamase family protein | chr5:25400515-25405807 FORWARD LENGTH=911
Medicago Medtr3g089020.1 1462 82.5 88.2 | RNA-metabolising metallo-beta-lactamase | HC | chr3:33966677-33957369 | 20130731
Soybean Glyma06g17980.1 1439 82.0 87.1  
LJGI gnl|LJGI|AW720152 995 100.0 100.0 homologue to UniRef100_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0261399.1 length: 864 aa.
IPR001279 Beta-lactamase-like
method AccNumber shortName E-value location
Molecular Function GO:0016787 hydrolase activity    
Gene3D G3DSA:3.60.15.10 no description 5e-66 75-325
HMMPfam PF00753 Lactamase_B 4.6e-21 85-245
HMMSmart SM00849 Metallo-beta-lactamase 1.5e-23 88-285
IPR004613 Ribonuclease J
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0016788 hydrolase activity, acting on ester bonds    
Molecular Function GO:0046872 metal ion binding    
HMMPanther PTHR11203:SF22 BETA-LACTAMASE 3.8e-185 53-760
IPR011108 RNA-metabolising metallo-beta-lactamase
HMMPfam PF07521 RMMBL 4.2e-09 431-462
IPR017877 Myb-like domain
ProfileScan PS50090 MYB_LIKE 7.631 770-830
no_ID  
HMMPanther PTHR11203 CLEAVAGE 3.8e-185 53-760
HMMPfam PF13837 Myb_DNA-bind_4 6.4e-14 772-853
Seg seg seg NA 24-33
762-780
superfamily SSF56281 Metallo-hydrolase/oxidoreductase 1.9e-43 76-469
Wolf-PSORT
Lj0g3v0261399.1	chlo 6, cyto 5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0261399.1