| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7KG72_SOYBN | 624 | 70.6 | 84.7 | (tr|K7KG72) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G11950.2 | 446 | 60.5 | 78.7 | | Symbols: | TRAF-like superfamily protein | chr3:3783273-3785098 REVERSE LENGTH=572 |
| Medicago | Medtr1g054715.1 | 597 | 73.2 | 83.1 | | TRAF-type zinc finger protein | HC | chr1:23886620-23891491 | 20130731 |
| Soybean | Glyma19g39140.1 | 612 | 70.7 | 84.8 | |
| LJGI | gnl|LJGI|TC78842 | 1707 | 100.0 | 100.0 | similar to UniRef100_A7PW27 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%) |
| Lj0g3v0259769.1 | length: 408 aa. | |||
| IPR001293 | Zinc finger, TRAF-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0008270 | zinc ion binding | ||
| ProfileScan | PS50145 | ZF_TRAF | 12.786 | 223-270 |
| IPR008974 | TRAF-like | |||
| Molecular Function | GO:0005515 | protein binding | ||
| superfamily | SSF49599 | TRAF | 4.1e-06 | 173-235 |
| IPR013323 | SIAH-type domain | |||
| Molecular Function | GO:0004842 | ubiquitin-protein ligase activity | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| Biological Process | GO:0016567 | protein ubiquitination | ||
| Gene3D | G3DSA:3.90.890.10 | no description | 0.00081 | 189-223 |
| no_ID | ||||
| HMMPanther | PTHR10131 | TNF | 5.9e-26 | 181-342 |
| HMMPfam | PF02176 | zf-TRAF | 5.2e-12 | 223-281 |
| Seg | seg | seg | NA | 317-321 |
Lj0g3v0259769.1 nucl 8, cyto 3, chlo 1, vacu 1, pero 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0259769.1 | Not targeted | -28.068 | 0 | -15.051 | 26.53% | -13.017 |