Miyakogusa Predicted Gene
- Lj0g3v0258079.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TH41_SOYBN |
128 |
72.0 |
83.9 |
(tr|C6TH41) Putative uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT2G36305.1 |
95.1 |
57.8 |
69.9 |
| Symbols: RCE1, ATFACE-2, ATFACE2, FACE2 | farnesylated protein-converting enzyme 2 | chr2:15214607-15216449 FORWARD LENGTH=311 |
| Medicago |
Medtr1g060300.1 |
132 |
71.1 |
83.3 |
| CAAX amino terminal protease family protein | HC | chr1:26237608-26244119 | 20130731 |
| Soybean |
Glyma13g22010.1 |
124 |
72.4 |
83.9 |
|
| LJGI |
gnl|LJGI|AV411327 |
632 |
100.0 |
100.0 |
similar to UniRef100_A7PPF3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0258079.1 |
length: 118 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR13046 |
PROTEASE |
2.2e-12 |
9-110 |
| Seg |
seg |
seg |
NA |
2-17 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
30 |
52 |
| 71 |
93 |
- Wolf-PSORT
Lj0g3v0258079.1 chlo 5, extr 3, mito 2, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, cyto_mito 1, E.R._vacu 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0258079.1 |
|