Miyakogusa Predicted Gene

Lj0g3v0258049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KUM2_SOYBN 608 48.3 57.6 (tr|I1KUM2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G01610.1 371 41.7 56.0 | Symbols: CDC48C, emb1354 | cell division cycle 48C | chr3:231787-235057 FORWARD LENGTH=820
Medicago Medtr2g007010.1 553 44.3 55.3 | cell division control-like protein | HC | chr2:785713-791640 | 20130731
Soybean Glyma08g19920.1 608 48.3 57.6  
LJGI gnl|LJGI|TC66646 704 99.2 99.2 weakly similar to UniRef100_A7QBR7 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0258049.1 length: 786 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.7 193-333
523-650
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 8.2e-08 197-330
561-605
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 301-319
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.1e-34 156-430
439-747
no_ID  
Gene3D G3DSA:1.10.8.60 no description 1.3e-08 664-730
Gene3D G3DSA:3.40.50.300 no description 1.6e-26 158-455
561-663
HMMPanther PTHR23077 AAA-FAMILY 4.9e-188 157-768
HMMPanther PTHR23077:SF16 NUCLEAR 4.9e-188 157-768
Seg seg seg NA 59-71
291-303
696-707
Wolf-PSORT
Lj0g3v0258049.1	chlo 5, mito 3, E.R. 2, mito_plas 2, nucl 1.5, cyto_mito 1.5, cysk_nucl 1.5, E.R._plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0258049.1