| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7KUN4_SOYBN | 283 | 64.8 | 73.8 | (tr|K7KUN4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G08350.1 | 215 | 39.0 | 50.7 | | Symbols: GTA02, GTA2 | global transcription factor group A2 | chr4:5286351-5292072 FORWARD LENGTH=1041 |
| Medicago | Medtr3g089910.1 | 244 | 59.4 | 68.8 | | transcription elongation factor SPT5-like protein, putative | HC | chr3:40863011-40870564 | 20130731 |
| Soybean | Glyma06g12770.1 | 283 | 64.8 | 73.8 | |
| LJGI | gnl|LJGI|FS350429 | 672 | 99.7 | 99.7 | weakly similar to UniRef100_A7NSK9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%) |
| Lj0g3v0258039.1 | length: 419 aa. | |||
| IPR005100 | Transcription elongation factor Spt5, NGN domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF03439 | Spt5-NGN | 1e-24 | 141-222 |
| IPR005824 | KOW | |||
| HMMSmart | SM00739 | KOW | 3.8e-05 | 267-294 319-346 |
| IPR005825 | Ribosomal protein L24/L26, conserved site | |||
| Molecular Function | GO:0003735 | structural constituent of ribosome | ||
| Cellular Component | GO:0005622 | intracellular | ||
| Cellular Component | GO:0005840 | ribosome | ||
| Biological Process | GO:0006412 | translation | ||
| PatternScan | PS01108 | RIBOSOMAL_L24 | NA | 271-288 |
| IPR006645 | Transcription antitermination protein, NusG, N-terminal | |||
| Biological Process | GO:0032968 | positive regulation of transcription elongation from RNA polymerase II promoter | ||
| HMMSmart | SM00738 | In | 3.4e-13 | 139-225 |
| IPR008991 | Translation protein SH3-like domain | |||
| superfamily | SSF50104 | Translation | 0.00039 | 310-371 230-319 |
| IPR017071 | Transcription elongation factor Spt5 | |||
| Biological Process | GO:0006357 | regulation of transcription from RNA polymerase II promoter | ||
| Biological Process | GO:0032784 | regulation of DNA-dependent transcription, elongation | ||
| HMMPanther | PTHR11125:SF7 | SUBFAMILY | 1.5e-68 | 27-370 |
| IPR022581 | Spt5 transcription elongation factor, N-terminal | |||
| HMMPfam | PF11942 | Spt5_N | 1.5e-07 | 48-131 |
| no_ID | ||||
| HMMPanther | PTHR11125 | SUPPRESSOR | 1.5e-68 | 27-370 |
| Seg | seg | seg | NA | 49-75 |
Lj0g3v0258039.1 cyto 12, nucl 1, cysk 1, cysk_nucl 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0258039.1 |