Miyakogusa Predicted Gene

Lj0g3v0257919.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I979_MEDTR 366 56.8 67.6 (tr|G7I979) Receptor serine/threonine kinase OS=Medicago truncatula GN=MTR_1g031540 PE=4 SV=1
TAIR_pep AT5G53110.1 99.0 32.5 49.8 | Symbols: | RING/U-box superfamily protein | chr5:21529022-21533008 FORWARD LENGTH=382
Medicago Medtr1g031320.1 370 55.6 67.8 | receptor-like kinase | HC | chr1:10928831-10931369 | 20130731
Soybean Glyma14g26960.1 190 38.8 56.3  
LJGI gnl|LJGI|TC61233 1487 99.9 99.9 weakly similar to UniRef100_A7Q559 Cluster: Chromosome undetermined scaffold_52, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_52, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0257919.2 length: 346 aa.
IPR011009 Protein kinase-like domain
method AccNumber shortName E-value location
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1.7e-07 292-335
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 310-332
IPR025287 Wall-associated receptor kinase galacturonan-binding domain
Molecular Function GO:0030247 polysaccharide binding    
HMMPfam PF13947 GUB_WAK_bind 2e-09 36-105
no_ID  
Gene3D G3DSA:3.30.200.20 no description 6.6e-09 268-339
HMMPanther PTHR24420 FAMILY 2e-21 236-335
HMMPanther PTHR24420:SF368SUBFAMILY NOT 2e-21 236-335
Seg seg seg NA 246-260
Putative transmembrane regions
  From To
TM segments
SOSUI		 5 27
Wolf-PSORT
Lj0g3v0257919.2	golg 5.5, golg_plas 5.5, plas 4.5, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0257919.2