Miyakogusa Predicted Gene

Lj0g3v0257359.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L9D8_MEDTR 447 85.9 87.8 (tr|G7L9D8) Heterogeneous nuclear ribonucleoprotein F OS=Medicago truncatula GN=MTR_8g073580 PE=4 SV=1
TAIR_pep AT5G66010.1 326 65.7 76.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:26399612-26400753 FORWARD LENGTH=255
Medicago Medtr8g073580.1 447 85.9 87.8 | heterogeneous nuclear ribonucleoprotein | HC | chr8:31129922-31132310 | 20130731
Soybean Glyma09g33090.1 441 84.2 87.6  
LJGI gnl|LJGI|TC72747 1116 97.6 97.6 similar to UniRef100_A7QWN7 Cluster: Chromosome chr4 scaffold_205, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_205, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0257359.2 length: 265 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 2e-09 60-129
177-249
ProfileScan PS50102 RRM 9.849 176-253
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 8.1e-25 57-138
158-264
no_ID  
HMMPanther PTHR13976 HETEROGENEOUS 4.4e-90 14-265
HMMPanther PTHR13976:SF20 SUBFAMILY 4.4e-90 14-265
HMMPfam PF14259 RRM_6 1.3e-15 61-127
180-247
Seg seg seg NA 44-67
superfamily SSF54928 RNA-binding 1.2e-21 53-260
Wolf-PSORT
Lj0g3v0257359.2	chlo 4, vacu 4, nucl 3, golg 2, cyto_nucl 2, chlo_mito 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0257359.2