Miyakogusa Predicted Gene

Lj0g3v0257159.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M440_SOYBN 1031 76.5 86.7 (tr|I1M440) Glutamate receptor OS=Glycine max PE=3 SV=1
TAIR_pep AT2G32400.1 701 55.1 72.0 | Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate receptor 5 | chr2:13752665-13756233 REVERSE LENGTH=921
Medicago Medtr2g088430.1 1028 76.2 87.1 | glutamate receptor 2 | HC | chr2:37273504-37278938 | 20130731
Soybean Glyma13g38460.1 1031 76.5 86.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0257159.1 length: 682 aa.
IPR001320 Ionotropic glutamate receptor
method AccNumber shortName E-value location
Molecular Function GO:0004970 ionotropic glutamate receptor activity    
Molecular Function GO:0005234 extracellular-glutamate-gated ion channel activity    
Cellular Component GO:0016020 membrane    
HMMPfam PF00060 Lig_chan 1.6e-07 594-648
HMMSmart SM00079 Eukaryotic 1.1e-05 472-679
IPR001638 Extracellular solute-binding protein, family 3
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0030288 outer membrane-bounded periplasmic space    
HMMPfam PF00497 SBP_bac_3 7.3e-07 490-576
IPR001828 Extracellular ligand-binding receptor
HMMPfam PF01094 ANF_receptor 2.4e-73 47-404
IPR002455 GPCR, family 3, gamma-aminobutyric acid receptor, type B
Molecular Function GO:0004965 G-protein coupled GABA receptor activity    
Biological Process GO:0007186 G-protein coupled receptor signaling pathway    
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR01176 GABABRECEPTR 1.3e-07 43-59
103-131
318-330
no_ID  
Gene3D G3DSA:1.10.287.70 no description 2e-09 592-654
Gene3D G3DSA:3.40.190.10 no description 9e-25 452-591
Gene3D G3DSA:3.40.50.2300 no description 1.8e-24 290-392
145-289
HMMPanther PTHR18966 IONOTROPIC 6.1e-299 1-643
HMMPanther PTHR18966:SF7 GLUTAMATE 6.1e-299 1-643
Seg seg seg NA 653-666
superfamily SSF53822 Periplasmic 3.5e-95 23-464
superfamily SSF53850 Periplasmic 6e-22 451-601
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 21
107 129
560 582
591 613
Wolf-PSORT
Lj0g3v0257159.1	vacu 6, chlo 1, cyto 1, mito 1, plas 1, extr 1, E.R. 1, pero 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0257159.1