Miyakogusa Predicted Gene

Lj0g3v0255889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K1J3_SOYBN 1014 59.2 71.7 (tr|K7K1J3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G17680.1 543 33.0 51.8 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr3g464030.1 768 58.9 72.2 | disease resistance protein (TIR-NBS-LRR class) | LC | chr3:25719727-25724275 | 20130731
Soybean Glyma01g03960.1 1000 53.0 66.0  
LJGI gnl|LJGI|TC82468 404 81.1 81.1 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance protein; n=1; Phaseolus vulgaris|Rep: Disease resistance protein - Phaseolus vulgaris (Kidney bean) (French bean), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0255889.1 length: 1272 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 6.8e-35 24-153
HMMSmart SM00255 Toll 2e-45 21-158
ProfileScan PS50104 TIR 26.984 20-158
superfamily SSF52200 Toll/Interleukin 2.5e-39 10-161
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.3e-18 218-233
363-377
999-1015
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.25 792-808
839-860
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 4.8e-29 199-255
257-429
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 3.3e-05 589-608
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 5.2e-07 980-1022
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.9e-29 178-400
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 2.2e-18 21-136
Gene3D G3DSA:3.40.50.300 no description 3.4e-06 204-256
Gene3D G3DSA:3.80.10.10 no description 1.4e-36 531-702
750-1021
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-234 15-1020
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-234 15-1020
Seg seg seg NA 218-228
786-797
944-960
superfamily SSF46785 "Winged 3.2e-17 398-504
superfamily SSF52047 RNI-like 8.4e-21 567-804
superfamily SSF52058 L 2.2e-42 721-1024
Wolf-PSORT
Lj0g3v0255889.1	nucl 5, chlo 3, plas 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0255889.1