Miyakogusa Predicted Gene
- Lj0g3v0254709.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SPD4_LOTJA |
381 |
99.5 |
99.5 |
(tr|I3SPD4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G07475.1 |
154 |
49.1 |
66.3 |
| Symbols: | Cupredoxin superfamily protein | chr5:2364827-2365536 REVERSE LENGTH=192 |
| Medicago |
Medtr1g090190.1 |
253 |
71.7 |
83.2 |
| plastocyanin-like domain protein | HC | chr1:40405961-40404679 | 20130731 |
| Soybean |
Glyma10g33720.1 |
263 |
67.9 |
82.6 |
|
| LJGI |
gnl|LJGI|TC61901 |
1104 |
99.8 |
99.8 |
weakly similar to UniRef100_Q6V5D0 Cluster: Cu2+ plastocyanin-like; n=1; Arabidopsis arenosa|Rep: Cu2+ plastocyanin-like - Cardaminopsis arenosa (Sand rock-cress) (Arabidopsis arenosa), partial (49%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0254709.1 |
length: 185 aa. |
| IPR003245 |
Plastocyanin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005507 |
copper ion binding |
|
|
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| BlastProDom |
PD003122 |
Q6V5E4_OLIPU_Q6V5E4; |
9e-19 |
54-118 |
| HMMPfam |
PF02298 |
Cu_bind_like |
4.3e-22 |
35-111 |
| ProfileScan |
PS51485 |
PHYTOCYANIN |
37.015 |
21-119 |
| IPR008972 |
Cupredoxin |
| Gene3D |
G3DSA:2.60.40.420 |
no description |
8.9e-32 |
20-121 |
| superfamily |
SSF49503 |
Cupredoxins |
1.3e-29 |
19-119 |
| no_ID |
|
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
5.000 |
1-18 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 159 |
181 |
- Wolf-PSORT
Lj0g3v0254709.1 plas 4.5, golg_plas 3.5, extr 3, vacu 3, chlo 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0254709.1 |
Not targeted |
-50.321 |
-9.096 |
-9.403 |
75.02% |
-31.822
|