Miyakogusa Predicted Gene
- Lj0g3v0254659.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7I8Z3_MEDTR |
212 |
91.8 |
94.5 |
(tr|G7I8Z3) Abscisic insensitive 1B OS=Medicago truncatula GN=MTR_1g015110 PE=3 SV=1 |
| TAIR_pep |
AT1G72770.3 |
181 |
72.7 |
90.0 |
| Symbols: HAB1 | homology to ABI1 | chr1:27390998-27392851 FORWARD LENGTH=511 |
| Medicago |
Medtr1g015110.1 |
212 |
91.8 |
94.5 |
| protein phosphatase 2C family protein | HC | chr1:3716339-3710663 | 20130731 |
| Soybean |
Glyma17g33410.2 |
208 |
89.2 |
94.6 |
|
| LJGI |
gnl|LJGI|CN825208 |
654 |
100.0 |
100.0 |
homologue to UniRef100_A4Q9A0 Cluster: Abscisic insensitive 1B; n=1; Populus tremula|Rep: Abscisic insensitive 1B - Populus tremula (European aspen), partial (33%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0254659.1 |
length: 110 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
3.5e-36 |
1-109 |
| HMMPfam |
PF00481 |
PP2C |
2.4e-23 |
1-99 |
| superfamily |
SSF81606 |
PP2C-like |
6.8e-27 |
1-108 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
4.5e-51 |
1-110 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF152DPP2C1 |
T[1-110] |
4.5e-51 |
|
- Wolf-PSORT
Lj0g3v0254659.1 chlo 5, extr 3, mito 2, nucl 1.5, cysk_nucl 1.5, cyto 1, pero 1, cyto_mito 1, cyto_pero 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0254659.1 |
|