Miyakogusa Predicted Gene

Lj0g3v0253949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JEL5_SOYBN 247 89.1 98.4 (tr|I1JEL5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80670.1 207 75.6 87.0 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349
Medicago Medtr8g068875.1 240 87.7 95.4 | plant poly(A)+ RNA export protein | HC | chr8:28820506-28812100 | 20130731
Soybean Glyma02g13780.1 247 89.1 98.4  
LJGI gnl|LJGI|TC61577 761 100.0 100.0 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_57, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0253949.1 length: 128 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 7.4e-06 22-50
66-96
HMMSmart SM00320 WD40 6.7e-05 11-50
59-97
ProfileScan PS50082 WD_REPEATS_2 10.508 18-59
65-106
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 5.8e-22 16-128
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 19.723 18-128
superfamily SSF50978 WD40 2.3e-20 11-128
no_ID  
HMMPanther PTHR10971 MRNA 6.8e-53 6-128
HMMPanther PTHR10971:SF11 MRNA 6.8e-53 6-128
Wolf-PSORT
Lj0g3v0253949.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0253949.1