Miyakogusa Predicted Gene

Lj0g3v0253939.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TCY4_SOYBN 369 94.5 96.7 (tr|C6TCY4) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G80670.1 359 90.7 96.2 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349
Medicago Medtr8g068875.1 368 92.9 96.2 | plant poly(A)+ RNA export protein | HC | chr8:28820506-28812100 | 20130731
Soybean Glyma02g13780.1 369 94.5 96.7  
LJGI gnl|LJGI|TC59341 777 92.5 92.5 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_57, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0253939.1 length: 182 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0023 80-107
HMMSmart SM00320 WD40 0.00073 19-58
63-107
ProfileScan PS50082 WD_REPEATS_2 9.840 75-116
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.9e-26 2-144
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 10.891 1-116
superfamily SSF50978 WD40 1.4e-16 1-147
no_ID  
HMMPanther PTHR10971 MRNA 3.6e-98 1-182
HMMPanther PTHR10971:SF11 MRNA 3.6e-98 1-182
Wolf-PSORT
Lj0g3v0253939.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0253939.1