Miyakogusa Predicted Gene

Lj0g3v0253889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNR7_LOTJA 274 72.0 72.0 (tr|I3SNR7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G25190.1 159 49.2 55.1 | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:8707007-8707655 REVERSE LENGTH=181
Medicago Medtr4g008860.1 191 54.8 58.3 | ethylene response factor | HC | chr4:1725344-1727163 | 20130731
Soybean Glyma07g02930.1 216 58.5 61.7  
LJGI gnl|LJGI|TC57807 1112 100.0 100.0 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0253889.1 length: 186 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 3e-11 8-19
30-46
Gene3D G3DSA:3.30.730.10 no description 1.7e-33 7-64
HMMPfam PF00847 AP2 1.4e-15 7-55
HMMSmart SM00380 DNA-binding 4.9e-40 7-70
ProfileScan PS51032 AP2_ERF 21.127 7-64
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.4e-22 6-67
no_ID  
HMMPanther PTHR31194 SHN 5e-36 2-68
HMMPanther PTHR31194:SF0 SHN 5e-36 2-68
Seg seg seg NA 40-52
67-85
96-115
Wolf-PSORT
Lj0g3v0253889.1	nucl 6.5, mito 4, cyto_nucl 4, chlo 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0253889.1