Miyakogusa Predicted Gene

Lj0g3v0253859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SCI3_LOTJA 580 92.2 92.2 (tr|I3SCI3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G51740.1 410 68.1 77.4 | Symbols: SYP81, ATUFE1, ATSYP81, UFE1 | syntaxin of plants 81 | chr1:19189063-19191188 FORWARD LENGTH=310
Medicago Medtr6g084580.1 540 85.1 89.0 | syntaxin-81 protein | HC | chr6:31694227-31701424 | 20130731
Soybean Glyma13g33450.1 533 84.1 88.3  
LJGI gnl|LJGI|TC67968 1834 99.8 99.8 similar to UniRef100_A7PID6 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0253859.1 length: 309 aa.
IPR010989 t-SNARE
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 4e-06 48-274
IPR019529 SNARE-complex protein Syntaxin-18 N-terminal
HMMPfam PF10496 Syntaxin-18_N 1.2e-15 5-86
no_ID  
Coil coil coiled-coil NA 69-90
94-115
Gene3D G3DSA:1.20.5.110 no description 1.4e-05 225-303
HMMPanther PTHR15959 SYNTAXIN-18 8.2e-91 2-309
HMMPanther PTHR15959:SF0 SUBFAMILY 8.2e-91 2-309
Seg seg seg NA 285-305
Putative transmembrane regions
  From To
TM segments
SOSUI		 284 305
Wolf-PSORT
Lj0g3v0253859.1	nucl 3, cyto 3, golg 3, cyto_nucl 3, vacu 2, nucl_plas 2, golg_plas 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0253859.1