Miyakogusa Predicted Gene
- Lj0g3v0253809.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MZ59_SOYBN |
620 |
70.3 |
79.8 |
(tr|I1MZ59) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G39910.1 |
394 |
51.5 |
66.7 |
| Symbols: | ARM repeat superfamily protein | chr2:16660604-16662886 FORWARD LENGTH=436 |
| Medicago |
Medtr3g070010.1 |
604 |
69.7 |
81.3 |
| ARM repeat protein | HC | chr3:31338912-31333667 | 20130731 |
| Soybean |
Glyma18g03500.1 |
618 |
70.3 |
79.6 |
|
| LJGI |
gnl|LJGI|TC62980 |
1784 |
99.9 |
99.9 |
homologue to UniRef100_Q59IV5 Cluster: Plastidic phosphate translocator-like protein2; n=1; Mesembryanthemum crystallinum|Rep: Plastidic phosphate translocator-like protein2 - Mesembryanthemum crystallinum (Common ice plant), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0253809.1 |
length: 449 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
5.7e-05 |
132-346 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
5.2e-07 |
200-407 |
| IPR018870 |
Protein of unknown function DUF2454 |
| HMMPfam |
PF10521 |
DUF2454 |
3.5e-09 |
176-335 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
64-82 |
- Wolf-PSORT
Lj0g3v0253809.1 chlo 4, nucl 2.5, chlo_mito 2.5, cyto 2, plas 2, E.R. 2, cysk_nucl 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0253809.1 |
|