Miyakogusa Predicted Gene

Lj0g3v0253079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K3J9_MEDTR 1096 70.6 77.8 (tr|G7K3J9) Bromodomain-containing protein OS=Medicago truncatula GN=MTR_5g093070 PE=4 SV=1
TAIR_pep AT5G55040.2 576 47.0 60.8 | Symbols: | DNA-binding bromodomain-containing protein | chr5:22327727-22331703 REVERSE LENGTH=916
Medicago Medtr5g093070.1 1096 70.6 77.8 | DNA-binding bromodomain protein | HC | chr5:40632258-40625775 | 20130731
Soybean Glyma18g10850.1 938 66.1 73.1  
LJGI gnl|LJGI|GO021708 1312 99.6 99.6 weakly similar to UniRef100_A7P0P0 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0253079.1 length: 913 aa.
IPR001487 Bromodomain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
FPrintScan PR00503 BROMODOMAIN 4.4e-13 214-230
230-248
248-267
Gene3D G3DSA:1.20.920.10 no description 6.3e-35 184-287
HMMPfam PF00439 Bromodomain 7.1e-24 190-271
HMMSmart SM00297 bromo 9.4e-30 178-286
ProfileScan PS50014 BROMODOMAIN_2 18.778 197-267
superfamily SSF47370 Bromodomain 3.7e-35 159-297
IPR018359 Bromodomain, conserved site
PatternScan PS00633 BROMODOMAIN_1 NA 203-259
no_ID  
Coil coil coiled-coil NA 76-100
109-131
HMMPanther PTHR22881 BROMODOMAIN 1.2e-98 9-839
HMMPanther PTHR22881:SF3 BROMODOMAIN 1.2e-98 9-839
Seg seg seg NA 38-47
54-68
72-82
87-98
114-157
634-645
730-740
748-762
Wolf-PSORT
Lj0g3v0253079.1	nucl 6, chlo 5, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0253079.1