Miyakogusa Predicted Gene
- Lj0g3v0252839.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N1F6_SOYBN |
419 |
69.3 |
80.6 |
(tr|I1N1F6) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G23850.1 |
125 |
28.3 |
48.3 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8425981-8427045 REVERSE LENGTH=354 |
| Medicago |
Medtr8g063930.1 |
367 |
61.2 |
77.5 |
| transmembrane protein | HC | chr8:26812665-26816284 | 20130731 |
| Soybean |
Glyma18g18870.1 |
387 |
67.1 |
77.2 |
|
| LJGI |
gnl|LJGI|GO013038 |
1166 |
98.8 |
98.8 |
similar to UniRef100_Q2QGD1 Cluster: ATP synthase F0 subunit 6; n=1; Manouria emys|Rep: ATP synthase F0 subunit 6 - Manouria emys, partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0252839.1 |
length: 327 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
6-17 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
26 |
48 |
| 100 |
122 |
| 150 |
172 |
| 188 |
210 |
| 219 |
241 |
| 249 |
271 |
| 281 |
303 |
- Wolf-PSORT
Lj0g3v0252839.1 plas 8, E.R. 4, nucl_plas 4, cysk_plas 4, mito_plas 4, cyto_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0252839.1 |
|