Miyakogusa Predicted Gene
- Lj0g3v0252829.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N1F7_SOYBN |
402 |
85.0 |
88.5 |
(tr|I1N1F7) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT1G23820.1 |
356 |
74.9 |
85.5 |
| Symbols: SPDS1 | spermidine synthase 1 | chr1:8420278-8422724 FORWARD LENGTH=378 |
| Medicago |
Medtr8g063940.1 |
388 |
81.8 |
88.9 |
| spermidine synthase | HC | chr8:26823287-26817588 | 20130731 |
| Soybean |
Glyma18g18880.1 |
399 |
84.1 |
88.1 |
|
| LJGI |
gnl|LJGI|TC76651 |
914 |
100.0 |
100.0 |
homologue to UniRef100_A0EVX4 Cluster: Spermidine synthase; n=1; Ammopiptanthus mongolicus|Rep: Spermidine synthase - Ammopiptanthus mongolicus, partial (69%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0252829.2 |
length: 227 aa. |
| IPR001045 |
Spermidine/spermine synthases family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| HAMAP |
MF_00198 |
Spermidine_synth |
17.795 |
1-223 |
| HMMPanther |
PTHR11558 |
SPERMIDINE/SPERMINE |
2.3e-128 |
1-227 |
| HMMPfam |
PF01564 |
Spermine_synth |
1.6e-69 |
1-182 |
| PatternScan |
PS01330 |
SPERMIDINE_SYNTHASE_1 |
NA |
16-29 |
| ProfileScan |
PS51006 |
SPERMIDINE_SYNTHASE_2 |
81.665 |
1-223 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.150 |
no description |
1.8e-86 |
1-222 |
| HMMPanther |
PTHR11558:SF11 |
SPERMIDINE |
2.3e-128 |
1-227 |
| Seg |
seg |
seg |
NA |
14-27 |
| superfamily |
SSF53335 |
S-adenosyl-L-methionine-dependent |
1e-65 |
1-224 |
- Wolf-PSORT
Lj0g3v0252829.2 cyto 10, plas 2, nucl 1, extr 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0252829.2 |
|