Miyakogusa Predicted Gene

Lj0g3v0251739.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JG98_MEDTR 815 75.6 87.7 (tr|G7JG98) SET domain protein OS=Medicago truncatula GN=MTR_4g082140 PE=4 SV=1
TAIR_pep AT1G26760.1 600 58.4 74.3 | Symbols: ATXR1, SDG35 | SET domain protein 35 | chr1:9248304-9249941 REVERSE LENGTH=545
Medicago Medtr4g082140.1 815 75.6 87.7 | TPR domain protein | HC | chr4:31887837-31885978 | 20130731
Soybean Glyma07g35640.1 766 71.7 84.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0251739.1 length: 528 aa.
IPR001214 SET domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00856 SET 8.5e-13 184-359
HMMSmart SM00317 SET 1.1e-09 173-366
ProfileScan PS50280 SET 13.529 172-364
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.5e-20 11-142
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 8.890 59-126
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 20 59-92
93-125
no_ID  
Gene3D G3DSA:2.170.270.10 no description 5.3e-18 312-386
HMMPanther PTHR12197 SET 5.5e-168 108-528
HMMPanther PTHR12197:SF69 SUBFAMILY 5.5e-168 108-528
HMMPfam PF13414 TPR_11 1.5e-07 12-90
Seg seg seg NA 464-477
superfamily SSF48452 TPR-like 1.1e-17 13-120
superfamily SSF82199 SET 9.1e-28 175-389
Wolf-PSORT
Lj0g3v0251739.1	cyto 9, nucl 3, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0251739.1 Not targeted -57.661 -4.182 -7.581 86.04% -45.898